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1.
Sci Rep ; 10(1): 8620, 2020 05 25.
Artigo em Inglês | MEDLINE | ID: mdl-32451399

RESUMO

Besides technical and tactical aspects, basketball matches involve high aerobic and anaerobic capacities, conferring the final performance of a team. Thus, the evaluation of physical and technical responses is an effective way to predict the performance of athletes. Field and laboratory tests have been used in sports. The first involving high ecological validity and low cost, and the second, greater control and accuracy but not easy application, considering the different preparation phases in a season. This study aimed, through complex networks analysis, to verify whether centrality parameters analysed from significant correlations behave similarly in distinct scenarios (laboratory and on-court), emphasizing aerobic and anaerobic physical parameters and technical performances. The results showed that, in a compelling  analysis involving basketball athletes, the studied centralities (degree, betweenness, eigenvector and pagerank) revealed similar responses in both scenarios, which is widely attractive considering the greater financial economy and lower time when applying tests in the field.

2.
Proteomics ; 1(8): 1033-42, 2001 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-11683504

RESUMO

Methanococcus jannaschii is an autotrophic archaeon originally isolated from an oceanic thermal vent. The primary metabolic pathway for energy production in this hyperthermophilic microbe is methanogenesis from H2 and CO2. As an autotroph, M. jannaschii requires only CO2 as a carbon source for synthesizing all necessary biomolecules. Changes in the environmental availability of these molecules can be expected to activate regulatory mechanisms manifested as the up and down regulation of specific genes and the concomitant increase and decrease in abundance of the corresponding proteins. In our analysis of the proteome of M. jannaschii, we have observed significant changes in the abundance of a common subset of predominant proteins in response to reduced H2 concentration, limited ammonium availability, and the stage of cell growth (exponential compared with stationary). The masses of tryptic peptides from these proteins match those predicted by M. jannaschii genome open reading frames annotated as flagellin B1 (MJ0891) and flagellin B2 (MJ0892). Multiple proteins with different isoelectric points and molecular weights match each of these proteins, and the abundance of these protein variants changes with growth conditions. These data indicate that structural modifications altering both the isoelectric point and size of the M. jannaschii flagellin B1 and B2 proteins occur in response to growth conditions and growth stage of M. jannaschii and further suggest the regulation of M. jannaschii motility through structural modifications of the building blocks of the flagella.


Assuntos
Proteínas Arqueais/química , Flagelina/química , Mathanococcus/química , Proteoma , Sequência de Aminoácidos , Eletroforese em Gel Bidimensional , Dados de Sequência Molecular , Conformação Proteica , Homologia de Sequência de Aminoácidos
3.
Arch Biochem Biophys ; 393(2): 192-8, 2001 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-11556805

RESUMO

NEUT2 mice are deficient in cytosolic 10-formyltetrahydrofolate dehydrogenase (FDH; EC 1.5.1.6) which catalyzes the oxidation of excess folate-linked one-carbon units in the form of 10-formyltetrahydrofolate to CO(2) and tetrahydrofolate (Champion et al., Proc. Natl. Acad. Sci. USA 91, 11338-11342, 1994). The absence of FDH should impair the oxidation of formate via the folate-dependent pathway and as a consequence render homozygous NEUT2 mice more susceptible to methanol toxicity. Normal (CB6-F1) and NEUT2 heterozygous and homozygous mice had essentially identical LD(50) values for methanol, 6.08, 6.00, and 6.03 g/kg, respectively. Normal mice oxidized low doses of [(14)C]sodium formate (ip 5 mg/kg) to (14)CO(2) at approximately twice the rate of homozygous NEUT2 mice, indicating the presence of another formate-oxidizing system in addition to FDH. Treatment of mice with the catalase inhibitor, 3-aminotriazole (1 g/kg ip) had no effect on the rate of formate oxidation, indicating that at low concentrations formate was not oxidized peroxidatively by catalase. High doses of [(14)C]sodium formate (ip 100 mg/kg) were oxidized to (14)CO(2) at identical rates in normal and NEUT2 homozygous mice. Pretreatment with 3-aminotriazole (1 g/kg ip) in this instance resulted in a 40 and 50% decrease in formate oxidation to CO(2) in both normal and homozygous NEUT2 mice, respectively. These results indicate that mice are able to oxidize formate to CO(2) by at least three different routes: (1) folate-dependent via FDH at low levels of formate; (2) peroxidation by catalase at high levels of formate; and (3) by an unknown route(s) which appears to function at both low and high levels of formate. The implications of these observations are discussed in terms of the current hypotheses concerning methanol and formate toxicity in rodents and primates.


Assuntos
Formiatos/metabolismo , Metanol/toxicidade , Oxirredutases atuantes sobre Doadores de Grupo CH-NH/metabolismo , Animais , Formiatos/administração & dosagem , Camundongos , Oxirredução , Oxirredutases atuantes sobre Doadores de Grupo CH-NH/deficiência , Oxirredutases atuantes sobre Doadores de Grupo CH-NH/genética
4.
Protein Expr Purif ; 22(3): 422-9, 2001 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-11483004

RESUMO

Expression of the human apoptosis modulator protein Bax in Escherichia coli is highly toxic, resulting in cell lysis at very low concentrations (Asoh, S., et al., J. Biol. Chem. 273, 11384-11391, 1998). Attempts to express a truncated form of murine Bax in the periplasm by using an expression vector that attached the OmpA signal sequence to the protein failed to alleviate this toxicity. In contrast, attachment of a peptide based on a portion of the E. coli cochaperone GroES reduced Bax's toxicity significantly and allowed good expression. The peptide, which was attached to the N-terminus, included the amino acid sequence of the mobile loop of GroES that has been demonstrated to interact with the chaperonin, GroEL. Under normal growth conditions, expression of this construct was still toxic, but generated a small amount of detectable recombinant Bax. However, when cells were grown in the presence of 2% ethanol, which stimulated overproduction of the molecular chaperones GroEL and DnaK, toxicity was reduced and good overexpression occurred. Two-dimensional gel electrophoresis analysis showed that approximately 15-fold more GroES-loop-Bax was produced under these conditions than under standard conditions and that GroEL and DnaK were elevated approximately 3-fold.


Assuntos
Chaperonina 10/genética , Sinais Direcionadores de Proteínas/genética , Proteínas Proto-Oncogênicas c-bcl-2 , Proteínas Proto-Oncogênicas/metabolismo , Animais , Eletroforese em Gel Bidimensional , Escherichia coli/genética , Escherichia coli/crescimento & desenvolvimento , Etanol/farmacologia , Expressão Gênica , Vetores Genéticos , Camundongos , Proteínas Proto-Oncogênicas/genética , Proteínas Recombinantes/biossíntese , Proteína X Associada a bcl-2
5.
Comp Funct Genomics ; 2(5): 275-88, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-18629240

RESUMO

Cell-free extracts from the hyperthermophilic archaeon Pyrococcus furiosus were separated into membrane and cytoplasmic fractions and each was analyzed by 2D-gel electrophoresis. A total of 66 proteins were identified, 32 in the membrane fraction and 34 in the cytoplasmic fraction. Six prediction programs were used to predict the subcellular locations of these proteins. Three were based on signal-peptides (SignalP, TargetP, and SOSUISignal) and three on transmembrane-spanning alpha-helices (TSEG, SOSUI, and PRED-TMR2). A consensus of the six programs predicted that 23 of the 32 proteins (72%) from the membrane fraction should be in the membrane and that all of the proteins from the cytoplasmic fraction should be in the cytoplasm. Two membrane-associated proteins predicted to be cytoplasmic by the programs are also predicted to consist primarily of transmembrane-spanning beta-sheets using porin protein models, suggesting that they are, in fact, membrane components. An ATPase subunit homolog found in the membrane fraction, although predicted to be cytoplasmic, is most likely complexed with other ATPase subunits in the membrane fraction. An additional three proteins predicted to be cytoplasmic but found in the membrane fraction, may be cytoplasmic contaminants. These include a chaperone homolog that may have attached to denatured membrane proteins during cell fractionation. Omitting these three proteins would boost the membrane-protein predictability of the models to near 80%. A consensus prediction using all six programs for all 2242 ORFs in the P. furiosus genome estimates that 24% of the ORF products are found in the membrane. However, this is likely to be a minimum value due to the programs' inability to recognize certain membrane-related proteins, such as subunits associated with membrane complexes and porin-type proteins.

6.
Electrophoresis ; 21(11): 2162-9, 2000 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10892727

RESUMO

Several studies with two-dimensional gel electrophoresis (2-DE) have shown that the abundance of numerous mouse liver proteins is altered in response to treatment with chemicals known to cause peroxisome proliferation. The peptide masses from tryptic digests of two liver proteins showing dramatic decreases in abundance in response to numerous peroxisome proliferators were used to search sequence databases. The selenium-binding protein 2 (SBP2 formerly 56 kDa acetaminophen-binding protein, AP 56) and selenium-binding protein 1 (SBP1 formerly 56 kDa selenium-binding protein, SP 56) in mouse liver, proteins with a high degree of sequence similarity, were the highest ranked identities obtained. Identity with SBP2 was subsequently confirmed by immunodetection with specific antiserum. Treatment of mice with 0.025% ciprofibrate resulted in the more basic of this pair of proteins being decreased to 30% of control abundance while the acidic protein was decreased to 7% of the control amount. Dexamethasone treatment, in contrast, caused increases of 80% and 20% in the abundance of the acidic and basic forms, respectively. Administration of dexamethasone to mice in combination with ciprofibrate produced expression of the acidic SBP2 at 23% of the control level and the basic SBP2 at 36%, a slightly moderated reduction compared with the decrease that occurred with ciprofibrate alone. These data suggest that peroxisome proliferators such as ciprofibrate cause a decrease in the abundance of the SBP2, which leads to increased cell proliferation, even in the presence of an inhibitor such as dexamethasone. Such a decrease in SBP, thought to serve as cell growth regulation factors, could be central to the nongenotoxic carcinogenicity of the peroxisome proliferators observed in rodents.


Assuntos
Proteínas de Transporte/metabolismo , Fígado/efeitos dos fármacos , Proliferadores de Peroxissomos/farmacologia , Animais , Divisão Celular , Eletroforese em Gel Bidimensional , Fígado/citologia , Fígado/metabolismo , Masculino , Espectrometria de Massas , Camundongos , Proteínas de Ligação a Selênio
7.
Electrophoresis ; 19(14): 2498-505, 1998 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-9820974

RESUMO

Interspecies differences in the liver response to Wy-14,643, a potent peroxisome proliferator in rats and mice, have been demonstrated. While both rats and mice show dramatic increases in the number of peroxisomes, the activity of peroxisomal enzymes involved in the beta-oxidation of fatty acids, and heptocyte replication, Syrian hamsters have a more moderate peroxisome proliferation response and no sustained increase in cell replication. Rats and mice, but not hamsters, develop hepatocellular carcinoma after prolonged exposure to Wy-14,643. To further characterize this species difference, two-dimensional gel electrophoresis (2-DE) has been used to compare the effect of 14-day exposure to various dietary concentrations of Wy-14,643 on liver protein expression in male mice and hamsters. Digitized images of the 2-DE protein maps were searched for significant changes. The peroxisome bifunctional enzyme (PBE) enoyl CoA hydratase/3-hydroxyacyl dehydrogenase, which migrates to the same position in mouse and hamster liver protein 2-DE patterns, increased in abundance by more than three times the control level in both mice and hamsters. In addition to the quantitative change in PBE, significant quantitative changes (P < 0.001) were found in 49 mouse liver proteins (47 decreasing and 2 increasing) and in 35 hamster liver proteins (27 decreasing and 8 increasing). There was little overlap in the mouse and hamster proteins showing quantitative changes in response to Wy-14,643, with the exception of PBE and one unidentified liver protein with an approximate molecular weight of 50,000. These results show that although peroxisome proliferation occurs in the livers of both mice and hamsters exposed to Wy-14,643, other species-specific changes in proteins occur that are independent of the peroxisome proliferation response and that could be related to species-specific susceptibility or resistance to liver tumor induction.


Assuntos
Isomerases , Fígado/efeitos dos fármacos , Fígado/metabolismo , Proliferadores de Peroxissomos/farmacologia , Proteínas/metabolismo , Pirimidinas/farmacologia , 3-Hidroxiacil-CoA Desidrogenases/metabolismo , Sequência de Aminoácidos , Animais , Cricetinae , Eletroforese/métodos , Eletroforese em Gel Bidimensional , Enoil-CoA Hidratase/metabolismo , Concentração de Íons de Hidrogênio , Fígado/ultraestrutura , Masculino , Mesocricetus , Camundongos , Dados de Sequência Molecular , Complexos Multienzimáticos/metabolismo , Enzima Bifuncional do Peroxissomo
8.
J Lipid Res ; 39(11): 2209-17, 1998 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-9799807

RESUMO

Fatty liver dystrophy ( fld) is an autosomal recessive mutation in mice characterized by hypertriglyceridemia and fatty liver during neonatal development. The fatty liver in fld/fld mice spontaneously resolves between the age of 14-18 days, at which point the animals develop a neuropathy associated with abnormal myelin formation in peripheral nerve. We have investigated the morphological and biochemical alterations that occur in the fatty liver of neonatal fld/fld mice. Studies at the light and electron microscopic level demonstrated the accumulation of lipid droplets and hypertrophic parenchymal cells in fld neonates, with no apparent liver pathology after resolution of the fatty liver. To better characterize the biochemical basis for the development of fatty liver in fld mice, we compared protein expression patterns in the fatty liver of fld mice and in the liver of phenotypically normal (wild-type) littermates using quantitative two-dimensional gel electrophoresis. We detected 24 proteins with significantly altered expression levels (P < 0.001) in the fld fatty liver, 15 of which are proteins that are altered in abundance by peroxisome proliferating chemicals. As these compounds characteristically elicit changes in the expression of mitochondrial and peroxisomal enzymes involved in fatty acid oxidation, we quantitated rates of fatty acid oxidation in hepatocytes isolated from fld and wild-type mice. These studies revealed that hepatic fatty acid oxidation in fld neonates is reduced by 60% compared to wild-type littermates. In hepatocytes from adult fld mice that no longer exhibit a fatty liver, oxidation rates were similar to those in hepatocytes from age-matched wild-type mice. These findings indicate that altered expression of proteins involved in fatty acid oxidation is associated with triglyceride accumulation in the fld fatty liver.


Assuntos
Doenças do Sistema Nervoso Autônomo/genética , Doenças do Sistema Nervoso Autônomo/metabolismo , Fígado Gorduroso/genética , Fígado Gorduroso/metabolismo , Hipertrigliceridemia/metabolismo , Proliferadores de Peroxissomos/metabolismo , Animais , Animais Recém-Nascidos , Doenças do Sistema Nervoso Autônomo/complicações , Células Cultivadas , Fígado Gorduroso/complicações , Genótipo , Hipertrigliceridemia/complicações , Lipase/metabolismo , Fígado/crescimento & desenvolvimento , Fígado/metabolismo , Fígado/ultraestrutura , Circulação Hepática , Camundongos , Camundongos Endogâmicos BALB C , Camundongos Mutantes , Microcirculação , Microscopia Eletrônica , Oxirredução , Ácido Palmítico/metabolismo , RNA Mensageiro/metabolismo , Triglicerídeos/metabolismo
9.
Electrophoresis ; 19(2): 333-43, 1998 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-9548300

RESUMO

High-resolution two-dimensional gel electrophoresis (2-DE) and database analysis was used to establish protein expression patterns for cultured normal human mammary epithelial cells and thirteen breast cancer cell lines. The Human Breast Epithelial Cell database contains the 2-DE protein patterns, including relative protein abundances, for each cell line, plus a composite pattern that contains all the common and specifically expressed proteins from all the cell lines. Significant differences in protein expression, both qualitative and quantitative, were observed not only between normal cells and tumor cells, but also among the tumor cell lines. Eight percent (56/727) of the consistently detected proteins were found in significantly (P< 0.001) variable levels among the cell lines. Eight proteins present in normal cultured breast epithelial cells were not detected in any of the tumor cell lines. We identified a subset of the differentially expressed proteins using a combination of immunostaining, protein sequencing, comigration, and subcellular fractionation. These identified proteins include the intermediate filament components vimentin and cytokeratins. The cell lines can be classified into four distinct groups based on their intermediate filament protein profile. We also identified heat shock proteins; hsp27 and hsp60 varied in abundance and in some cases in the relative phosphorylation levels among the cell lines. Many of the differentially expressed proteins we identified have roles in cellular proliferation and differentiation, including annexin V, elongation initiation factor 5A, Rho GDP dissociation inhibitor, and prohibitin. We identified inosine-5-monophosphate dehydrogenase in each of the cell lines, and found the levels of this enzyme in the tumor cell lines elevated 2- to 20-fold relative to the levels in normal cells. These results expand the human breast epithelial cell protein database (http:// www.anl.gov/CMB/PMG) which is being built to assist researchers with the identification of abnormal patterns of expression and pathways associated with malignancy.


Assuntos
Neoplasias da Mama/metabolismo , Células Epiteliais/metabolismo , Proteínas de Neoplasias/metabolismo , Sequência de Aminoácidos , Aminoácidos , Células Cultivadas , Proteínas do Citoesqueleto/metabolismo , Feminino , Proteínas de Choque Térmico/metabolismo , Humanos , IMP Desidrogenase/metabolismo , Dados de Sequência Molecular , Análise de Sequência , Frações Subcelulares , Células Tumorais Cultivadas
10.
Muscle Nerve ; 20(5): 561-9, 1997 May.
Artigo em Inglês | MEDLINE | ID: mdl-9140362

RESUMO

Muscle biopsies at age 7 months in a set of dizygotic male twins born floppy showed typical features of congenital fiber-type disproportion (CFTD). One of the twins died at age 1 year due to respiratory complications. The second one subsequently developed facial diplegia and external ophthalmoplegia. He never walked, remained wheelchair bound, and required continuous ventilatory support. He underwent repeat biopsies at ages 2 and 4, which showed many atrophic type 1 muscle fibers containing central nuclei and severe type 2 fiber deficiency compatible with centronuclear myopathy (CNM). Two-dimensional gel electrophoresis of muscle showed decreases of type II myosin light chains 2 and 3, suggestive of histochemical type I fiber deficiency. The progressive nature of morphological changes in one of our patients cannot be explained by maturational arrest. Repeat biopsies in cases of CFTD with rapid clinical deterioration may very well show CNM.


Assuntos
Doenças em Gêmeos , Fibras Musculares Esqueléticas/ultraestrutura , Doenças Musculares/congênito , Doenças Musculares/patologia , Biópsia , Humanos , Lactente , Masculino , Microscopia Eletrônica
11.
Electrophoresis ; 18(3-4): 573-81, 1997.
Artigo em Inglês | MEDLINE | ID: mdl-9150944

RESUMO

As sequencing of the human genome progresses, attention is turning to when and where specific genes are being expressed and how that expression is regulated. The human breast, with the highly specific, but transient, function of milk production (lactation), exemplifies human gene regulation. The molecular mechanisms for the dramatic structural and functional changes involved in shifting from lactation-capable to lactation-incapable tissue are poorly understood, as are the mechanisms that result in deviation from normal breast cell growth into different types of breast neoplasms. We are using quantitative two-dimensional electrophoresis (2-DE) to determine which proteins are present in different types of human breast cells (milk-producing and -nonproducing, estrogen-receptor-positive and -negative, normal and malignant) and which proteins change in abundance in response to stimuli that trigger cell differentiation, growth, or death. A composite map of proteins found in human breast cells is being generated and used as an index of human genes that are differentially expressed, both qualitatively and quantitatively. Proteins found in 15 different types of human breast cells, two from healthy tissue (from milk and reduction mammoplasty tissue) and 13 from tumor tissue, are now included in the composite map. Copies of the human breast epithelial cell protein map are available on the World Wide Web (URL: http:(/)/www.anl.gov/CMB/PMG/ projects/index_hbreast.html) with links to quantitative data and identifications for proteins found to be differentially expressed in these epithelial cells. Links to the Swiss-Prot and enzyme metabolic pathway databases are also provided. The World Wide Web presentation is designed to allow public access to the available 2-DE data together with logical connections to databases providing genome-related information.


Assuntos
Mama/química , Redes de Comunicação de Computadores , Bases de Dados Factuais , Eletroforese em Gel Bidimensional/métodos , Epitélio/química , Proteínas de Neoplasias/análise , Proteínas/análise , Mama/citologia , Linhagem Celular , Células Epiteliais , Feminino , Humanos , IMP Desidrogenase/análise , Acetato de Tetradecanoilforbol/farmacologia , Células Tumorais Cultivadas
12.
Carcinogenesis ; 17(11): 2357-65, 1996 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-8968049

RESUMO

Mice bearing the autosomal recessive mutation 'wasted' (wst/wst) express a disease syndrome characterized by neurologic dysfunction, immunodeficiency, and increased sensitivity to the killing effects of ionizing radiation relative to normal littermates (wst/-) and to parental control mice (BCF1, BALB/c, and C57BL/6). Many of these abnormalities, evident as early as 21 days of age, have been localized to thymic tissues and T-lymphocyte populations. Comparison of two-dimensional gel electrophoresis patterns of proteins from wst/wst and control mouse thymus revealed that an acidic protein with a molecular mass of approximately 30 kDa was consistently expressed at lower levels in wasted mice than in controls. Microsequencing of this protein revealed a sequence of 19 N-terminal amino acids identical to the sequence of murine proliferating cell nuclear antigen (PCNA). Northern blot analyses of PCNA expression in thymus and spleen demonstrated lower accumulation of PCNA-specific transcripts in wasted mice compared with that in controls. Because PCNA expression is associated with cell cycle progression, the percentages of thymic and splenic cells in each stage of the cell cycle were examined; there were no differences in the cell stage distribution of lymphocytes freshly isolated from wasted mice compared with littermate or parental controls. After activation with concanavalin A, however, splenocytes from wst/wst mice showed a lower percentage of cells in S phase compared with that in controls. Southern blots with PCNA probes showed that the PCNA loci from the wasted mice and their normal littermates have the same restriction maps. While differences in polymerase chain reaction (PCR) priming were obtained, these could be attributed to strain-specific differences in mouse PCNA pseudogenes. These results suggest the presence of an alteration in the pathway leading to PCNA expression in radiation-sensitive tissues of wasted mice.


Assuntos
Antígeno Nuclear de Célula em Proliferação/biossíntese , Tolerância a Radiação/fisiologia , Timo/fisiologia , Síndrome de Emaciação/metabolismo , Animais , Sequência de Bases , Eletroforese em Gel Bidimensional , Feminino , Masculino , Camundongos , Camundongos Endogâmicos BALB C , Camundongos Endogâmicos C57BL , Dados de Sequência Molecular , Fenótipo , Homologia de Sequência do Ácido Nucleico , Timo/metabolismo , Síndrome de Emaciação/genética
13.
Electrophoresis ; 16(7): 1215-24, 1995 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-7498169

RESUMO

The human breast is a highly specialized, complex tissue comprised of a heterogeneous population of cells with varying functions. Interactions between the different cell types, changes in their relative abundance, state of differentiation and function in response to stimuli, as well as the alterations that lead to the aberrant growth associated with malignancy are poorly understood. Two-dimensional gel electrophoresis is being used to compare the proteins found in different breast cells in order to identify the gene products that are common or specific to particular cell types so as to provide markers that will be useful in studies of normal breast cell differentiation and the dedifferentiation or blocked differentiation characteristic of cancer. Protein patterns have been obtained from cells prepared for electrophoresis immediately after isolation from human milk, from cells cultured for fewer than ten passages after isolation from healthy breast tissue removed during reduction mammoplasty, and from cells maintained in long-term tissue culture after isolation from the pleural effusions of patients with breast carcinomas. Differential expression of cytokeratins 8, 18, and 19, shown previously to be predominantly expressed by epithelial cells in the luminal layer of breast tissue, was observed among the cells analyzed. Other non-cytokeratin proteins were also found to be differentially expressed in subsets of both the normal and tumor cells. A composite human breast cell protein pattern was created which includes all the commonly and specifically expressed proteins found in this study. This pattern will be the basis for continuing studies of proteins in the human breast.


Assuntos
Mama/química , Eletroforese em Gel Bidimensional , Proteínas de Neoplasias/análise , Proteínas/análise , Sequência de Aminoácidos , Animais , Mama/citologia , Diferenciação Celular/fisiologia , Células Epiteliais , Epitélio/química , Feminino , Humanos , Queratinas/análise , Masculino , Camundongos , Camundongos Nus , Dados de Sequência Molecular , Transplante de Neoplasias , Caracteres Sexuais , Células Tumorais Cultivadas
14.
J Chromatogr A ; 698(1-2): 301-32, 1995 Apr 28.
Artigo em Inglês | MEDLINE | ID: mdl-7773366

RESUMO

Polyacrylamide gel electrophoresis plays a major role in analyzing the function of muscle structural proteins. This review describes one- and two-dimensional gel electrophoretic methods for qualitative and quantitative investigation of the muscle proteins, with special emphasis on determination of protein phosphorylation. The electrophoretic studies established the subunit structures of the muscle proteins, characterized their multiple forms, revealed changes in subunit composition or shifts in isoform distribution of specific proteins during development, upon stimulation or denervation of the muscle. Protein phosphorylation during muscle contraction is preferentially studied by two-dimensional gel electrophoresis. The same method demonstrated protein alterations in human neuromuscular diseases.


Assuntos
Eletroforese em Gel de Poliacrilamida , Proteínas Musculares/isolamento & purificação , Músculos/química , Animais , Humanos
15.
Proc Natl Acad Sci U S A ; 91(24): 11338-42, 1994 Nov 22.
Artigo em Inglês | MEDLINE | ID: mdl-7972060

RESUMO

During the analysis of liver protein expression in the offspring of male mice irradiated with fission-spectrum neutrons, one offspring displayed a heritable 50% decrease in the abundance of two proteins. Homozygous mice lacking detectable quantities of these proteins were obtained through breeding. Characterization of this protein deficiency has identified these liver proteins as forms of the enzyme 10-formyltetrahydrofolate dehydrogenase (10-formyl-THF DH; 10-formyltetrahydrofolate:NADP+ oxidoreductase, EC 1.5.1.6). NH2-terminal sequence analysis demonstrated that both proteins share identical sequences in the first 25 residues, and this sequence matches (96% identity) that of rat and human 10-formyl-THF DH. In addition, these proteins showed cross-reactivity to polyclonal antiserum raised against purified rat 10-formyl-THF DH. Southern (DNA) blot analysis revealed a restriction fragment length polymorphism consistent with a deletion mutation in the 10-formyl-THF DH structural gene in homozygous mice. Results of Northern (RNA) blot analysis demonstrated the absence of 10-formyl-THF DH mRNA in mice lacking 10-formyl-THF DH protein. Furthermore, liver cytosolic 10-formyl-THF DH enzymatic activity was undetectable in homozygotes. Measurement of hepatic folate pools showed that in homozygotes the total folate pool is decreased and the level of tetrahydrofolate is markedly depleted.


Assuntos
Oxirredutases atuantes sobre Doadores de Grupo CH-NH/genética , Animais , Sequência de Bases , Eletroforese em Gel Bidimensional , Ácido Fólico/metabolismo , Expressão Gênica , Genes , Humanos , Fígado/metabolismo , Camundongos , Camundongos Mutantes , Dados de Sequência Molecular , RNA Mensageiro/genética , Ratos
16.
Mutat Res ; 320(1-2): 75-85, 1994 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-7506389

RESUMO

Liver protein expression in F1 offspring arising from spermatogonia exposed to 60 cGy of fission spectrum neutrons from the JANUS reactor was compared to that in offspring from unexposed spermatogonia by using two-dimensional electrophoresis (2DE). Approximately 100 protein spots in 2DE patterns from 167 control offspring and 530 offspring from irradiated sires were monitored for quantitative decreases of 50%, indicative of mutation events causing the loss of one normal copy of a structural gene. Reproducible abnormalities were found only in 3 patterns, all from the offspring of neutron-irradiated sires. Two of the three patterns were from littermates (brother and sister) and both showed an approximately 70% decrease in the amount of liver protein MSN188. The third pattern was from a male mouse sired by a different male and showed an approximately 50% decrease in the abundance of protein MSN94. The decreased abundance of MSN188 and MSN94 was assumed to be due to mutation events referred to as NEUT1 and NEUT2, respectively. Sibling crosses between the 2 mice showing the NEUT1 trait produced offspring with control, decreased and undetectable levels of MSN188 in a ratio of 0.25:0.5:0.25. Test crosses between the F1 offspring expressing the NEUT2 trait back to C57BL/6JANL mice produced offspring expressing normal or decreased amounts of MSN94 in a ratio of 0.5:0.5. Inbreeding of individuals expressing decreased amounts of MSN94 produced mice expressing control, decreased amounts, or no detectable amount of that protein in a ratio of 0.25:0.5:0.25. These results indicate that the decreased abundance of MSN188 or MSN94 originally detected in the F1 offspring is due to a genetically transmissible event. Unlike the heritable protein changes observed previously in the F1 offspring of sires exposed to N-ethyl-N-nitrosourea in which a protein variant was produced, both the NEUT1 and NEUT2 mutation events appear to prevent the production of any protein product. These 2 mutations may thus represent mutation lesions other than point mutations (e.g., deletions or translocations) detectable as quantitative changes in protein expression in the F1 generation.


Assuntos
Genes/efeitos da radiação , Mutação em Linhagem Germinativa , Fígado/metabolismo , Nêutrons , Proteínas/genética , Espermatogônias/efeitos da radiação , Animais , Distribuição de Qui-Quadrado , Eletroforese em Gel Bidimensional , Feminino , Deleção de Genes , Fígado/efeitos da radiação , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Biossíntese de Proteínas , Irradiação Corporal Total
17.
Biochem Biophys Res Commun ; 189(3): 1261-7, 1992 Dec 30.
Artigo em Inglês | MEDLINE | ID: mdl-1336363

RESUMO

Okadaic acid (OA), an inhibitor of protein phosphatases 1 and 2A, induces differentiation in human MCF-7, AU-565, and MB-231 breast tumor cells. In MCF-7 cells, OA elicited within 5 min an increase in the levels of a set of phosphorylated cellular proteins, within hours expression of the early response genes junB, c-jun, and c-fos, and within days manifestation of differentiation. Differentiation was also induced by two related protein phosphatase inhibitors, but not by an inactive OA derivative or by an inhibitor that penetrates epithelial cells poorly. These results indicate that OA and related agents can induce tumor breast cell differentiation, and this induction is correlated with their ability to inhibit PPH 1 and 2A.


Assuntos
Diferenciação Celular/efeitos dos fármacos , Éteres Cíclicos/farmacologia , Genes fos/efeitos dos fármacos , Genes jun/efeitos dos fármacos , Isoenzimas/antagonistas & inibidores , Fosfoproteínas Fosfatases/antagonistas & inibidores , Fosfoproteínas/metabolismo , Anticorpos Monoclonais , Autorradiografia/métodos , Northern Blotting , Neoplasias da Mama , Caseínas/análise , Caseínas/metabolismo , Eletroforese em Gel de Poliacrilamida , Feminino , Imunofluorescência , Expressão Gênica , Humanos , Cinética , Toxinas Marinhas , Microcistinas , Ácido Okadáico , Sondas de Oligonucleotídeos , Oxazóis/farmacologia , Peptídeos Cíclicos/farmacologia , Fosfatos/metabolismo , Fosfoproteínas/isolamento & purificação , Radioisótopos de Fósforo , Fosforilação , Piranos/farmacologia , Acetato de Tetradecanoilforbol/farmacologia , Células Tumorais Cultivadas
18.
Electrophoresis ; 13(12): 970-91, 1992 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-1286668

RESUMO

Alterations in the abundance or structure of mouse liver proteins are being studied using two-dimensional gel electrophoresis (2-DE) to build a database of protein changes correlating with exposure to ionizing radiation or toxic chemicals. Thus far, studies have included the analysis of proteins from the offspring of exposed parents or from the exposed individuals themselves. In order to characterize and identify proteins found altered by such exposures, sex- and strain-related differences in protein patterns have been analyzed, and the subcellular locations of a large portion of the mapped proteins have been determined. As part of these studies, data are collected and stored using a variety of computer hardware and software tools that allow the accumulation of information on the origin of samples, gel identification, experiment description, and protein similarities and differences. This accumulation of information constitutes the mouse liver protein database. Relational database software is used to tie the different facets of the database together so that the results of a variety of experiments can be compared and interrelated. The database optimizes the information obtained from 2-DE gel sets by allowing use of the data for many purposes, including monitoring of gel resolution to ensure the collection of high quality data and correlation of protein effects induced by different agents. This first edition of the Argonne National Laboratory mouse liver protein database lays the foundation for future work and communication that should elucidate the significance of observed protein effects as possible markers of exposure to toxic agents.


Assuntos
Bases de Dados Factuais , Eletroforese em Gel Bidimensional , Fígado/química , Proteínas/análise , Animais , Feminino , Masculino , Camundongos , Camundongos Endogâmicos , Peso Molecular , Mapeamento de Peptídeos/métodos , Caracteres Sexuais , Especificidade da Espécie , Frações Subcelulares/química
19.
Artigo em Inglês | MEDLINE | ID: mdl-1360372

RESUMO

1. ENU4 mice express a protein variant originally detected in a CBF1 mouse sired by a C57BL/6 mouse exposed to N-ethyl-N-nitrosourea. It appears to be an isoelectric point variant of cytosolic epoxide hydrolase. Affinity purified cytosolic epoxide hydrolase from ENU4 mice has a pI of approximately 5.1 compared to 5.6 in other mouse strains. 2. Clofibrate induced cytosolic epoxide hydrolase to similar levels in five strains of mice. However, CBF1 and ENU4 mice were more sensitive to the induction of palmitoyl CoA oxidase activity. 3. Except for isoelectric point, the physico- and immunochemical properties of cytosolic epoxide hydrolase from ENU4 mice were similar to those of the other mouse strains. Substrate specificities for five of six substrates tested were also similar.


Assuntos
Citosol/enzimologia , Epóxido Hidrolases/metabolismo , Etilnitrosoureia/toxicidade , Animais , Western Blotting , Cromatografia de Afinidade , Clofibrato/farmacologia , Eletroforese em Gel de Poliacrilamida , Indução Enzimática , Epóxido Hidrolases/química , Epóxido Hidrolases/isolamento & purificação , Feminino , Ponto Isoelétrico , Camundongos , Camundongos Endogâmicos BALB C , Oxirredutases/metabolismo , Gravidez
20.
J Appl Physiol (1985) ; 73(2 Suppl): 33S-43S, 1992 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-1382050

RESUMO

Spaceflight (flight) and tail suspension-hindlimb unloading (unloaded) produced significant decreases in fiber cross-sectional areas of the adductor longus (AL), a slow-twitch antigravity muscle. However, the mean wet weight of the flight AL muscles was near normal, whereas that of the suspension unloaded AL muscles was significantly reduced. Interstitial edema within the flight AL, but not in the unloaded AL, appeared to account for this apparent disagreement. In both experimental conditions, the slow-twitch oxidative fibers atrophied more than the fast-twitch oxidative-glycolytic and fast-twitch glycolytic fibers. Immunostaining showed that slow-twitch oxidative fibers expressed fast myosin, producing hybrid fibers containing slow and fast myosin isoforms. Two-dimensional gel electrophoresis of flight AL muscles revealed increased content of fast myosin light chains and decreased amounts of slow myosin light chains and fatty acid-binding protein. In the flight AL, absolute mitochondrial content decreased, but the relatively greater breakdown of myofibrillar proteins maintained mitochondrial concentration near normal in the central intermyofibrillar regions of fibers. Subsarcolemmal mitochondria were preferentially lost and reduced below normal concentration. Elevated fiber immunostaining for ubiquitin conjugates was suggestive of ubiquitin-mediated breakdown of myofibrillar proteins. On return to weight bearing for 8-11 h, the weakened atrophic muscles exhibited eccentric contraction-like lesions (hyperextension of sarcomeres with A-band filaments pulled apart and fragmented), tearing of the supporting connective tissue, and thrombosis of the microcirculation. Segmental necrosis of muscle fibers, denervation of neuromuscular junctions, and extravasation of red blood cells were minimal. Lymphocyte antibody markers did not indicate a significant immune reaction. The flight AL exhibited threefold more eccentric-like lesions than the unloaded AL; the high reentry G forces experienced by the flight animals, but not the unloaded group, possibly accounted for this difference. Muscle atrophy appears to increase the susceptibility to form eccentric contraction-like lesions after reloading; this may reflect weakening of the myofibrils and extracellular matrix. Microcirculation was also compromised by spaceflight, such that there was increased formation of thrombi in the post-capillary venules and capillaries. This blockage led to edema by 8-11 h after resumption of weight bearing by the COSMOS 2044 rats. The present findings indicate that defective microcirculation most likely accounted for the extensive tissue necrosis and microhemorrhages observed for COSMOS 1887 rats killed 2 days after landing.


Assuntos
Músculos/fisiologia , Sarcômeros/fisiologia , Voo Espacial , Trombose/fisiopatologia , Ausência de Peso/efeitos adversos , Animais , Atrofia/patologia , Edema/patologia , Edema/fisiopatologia , Membro Posterior/fisiologia , Mitocôndrias Musculares/ultraestrutura , Contração Muscular/fisiologia , Músculos/patologia , Músculos/ultraestrutura , Miosinas/metabolismo , Tamanho do Órgão , Ratos , Sarcômeros/ultraestrutura , Coloração e Rotulagem
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